Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX463662: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-316307' containing sample 'Staphylococcus aureus W83140'
2 ILLUMINA (Illumina HiSeq 2000) runs: 6.4M spots, 1.3G bases, 613.5Mb downloads

UUID: 6c072904-3fd2-433d-82bc-feec77be1205

Design: Illumina sequencing of Staphylococcus aureus W83140 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA226974 • SRP036535 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus W83140

SAMN02398912 • SRS552340 • All experiments • All runs

Organism: Staphylococcus aureus W83140

Library:

Name: Pond-316307

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 463587.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5BCA3

material_type: DNA:DNA Somatic

product_order: PDO-2426

product_part_number: P-WG-0004

project: G52174

research_project: RP-509

root_sample_id: SM-4T65Z

sample_id: SM-5BCA3

work_request: 39164

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-27 21:23:52.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 6.4M spots, 1.3G bases, 613.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR1159883	3,208,598	648.1M	308Mb	2014-02-04
SRR1163049	3,183,139	643M	305.6Mb	2014-02-06

ID:: 643830

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